{
  "fixed_input_path": "outputs/nifti/patient1_fixed.nii.gz",
  "moving_input_path": "outputs/nifti/patient1_moving.nii.gz",
  "fixed_output_path": "outputs/preprocessed/patient1_fixed_preprocessed.nii.gz",
  "moving_output_path": "outputs/preprocessed/patient1_moving_preprocessed.nii.gz",
  "fixed_resampled_shape_xyz": [
    288,
    288,
    317
  ],
  "moving_resampled_shape_xyz": [
    331,
    331,
    334
  ],
  "target_shape_xyz": [
    320,
    320,
    352
  ],
  "target_spacing_xyz": [
    1.0,
    1.0,
    1.0
  ],
  "fixed_neck_center_index_xyz": [
    143.0,
    160.5,
    159.5
  ],
  "moving_neck_center_index_xyz": [
    164.5,
    195.0,
    170.0
  ],
  "fixed_neck_center_world_mm": [
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  ],
  "moving_neck_center_world_mm": [
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  ],
  "moving_translation_mm": [
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  ],
  "body_threshold_hu": -500.0,
  "foreground_percentiles": [
    2.0,
    98.0
  ],
  "method": "neck-mask-centroid-translation"
}